2017

Does noncontact low-frequency ultrasound therapy contribute to wound healing at the molecular level?
Wiegand C, Bittenger K, Galiano RD, Driver VR, Gibbons GW.  Wound Repair Regen. 2017 Sep;25(5):871-882. doi: 10.1111/wrr.12595. Epub 2017 Dec 8. PubMed PMID: 29098740.

A Pilot Characterization of the Human Chronobiome.
Skarke C, Lahens NF, Rhoades SD, Campbell A, Bittinger K, Bailey A, Hoffmann C, Olson RS, Chen L, Yang G, Price TS, Moore JH, Bushman FD, Greene CS, Grant GR, Weljie AM, FitzGerald GA.  Sci Rep. 2017 Dec 7;7(1):17141. doi: 10.1038/s41598-017-17362-6. PubMed PMID: 29215023; PubMed Central PMCID: PMC5719427.

A role for bacterial urease in gut dysbiosis and Crohn’s disease.
Ni J, Shen TD, Chen EZ, Bittinger K, Bailey A, Roggiani M, Sirota-Madi A, Friedman ES, Chau L, Lin A, Nissim I, Scott J, Lauder A, Hoffmann C, Rivas G, Albenberg L, Baldassano RN, Braun J, Xavier RJ, Clish CB, Yudkoff M, Li H, Goulian M, Bushman FD, Lewis JD, Wu GD. . Sci Transl Med. 2017 Nov 15;9(416). pii: eaah6888. doi: 10.1126/scitranslmed.aah6888. PubMed PMID: 29141885; PubMed Central PMCID: PMC5808452.

Host-microbe interactions: Malassezia and human skin
Grice EA, Dawson TL 23⁎Jr. Curr Opin Microbiol. 2017 Dec;40:81-87. doi: 10.1016/j.mib.2017.10.024. Epub 2017 Nov 12. Review. PubMed PMID: 29141240.

The preadolescent acne microbiome: A prospective, randomized, pilot study investigating characterization and effects of acne therapy
Coughlin CC, Swink SM, Horwinski J, Sfyroera G, Bugayev J, Grice EA, Yan AC. Pediatr Dermatol. 2017 Nov;34(6):661-664. doi: 10.1111/pde.13261. Epub 2017 Oct 11. PubMed PMID: 29024079.

Viral communities of the human gut: metagenomic analysis of composition and dynamics.
Aggarwala V, Liang G, Bushman FD. Mob DNA. 2017 Oct 3;8:12. doi: 10.1186/s13100-017-0095-y. eCollection 2017. Review. PubMed PMID: 29026445; PubMed Central PMCID: PMC5627405.

Cutaneous Burn Injury Promotes Shifts in the Bacterial Microbiome in Autologous Donor Skin: Implications for Skin Grafting Outcomes
Plichta JK, Gao X, Lin H, Dong Q, Toh E, Nelson DE, Gamelli RL, Grice EA, Radek KA.  Shock. 2017 Oct;48(4):441-448. doi: 10.1097/SHK.0000000000000874. PubMed PMID: 28368977; PubMed Central PMCID: PMC5603347.

Protective major histocompatibility complex allele prevents type 1 diabetes by shaping the intestinal microbiota early in ontogeny.
Silverman M, Kua L, Tanca A, Pala M, Palomba A, Tanes C, Bittinger K, Uzzau S, Benoist C, Mathis D. Proc Natl Acad Sci U S A. 2017 Sep 5;114(36):9671-9676. doi: 10.1073/pnas.1712280114. Epub 2017 Aug 22. PubMed PMID: 28831005; PubMed Central PMCID: PMC5594701.

Topical Antimicrobial Treatments Can Elicit Shifts to Resident Skin Bacterial Communities and Reduce Colonization by Staphylococcus aureus Competitors
SanMiguel AJ, Meisel JS, Horwinski J, Zheng Q, Grice EA. Antimicrob Agents Chemother. 2017 Aug 24;61(9). pii: e00774-17. doi: 10.1128/AAC.00774-17. Print 2017 Sep. PubMed PMID: 28630195; PubMed Central PMCID: PMC5571303.

Whole genome characterization of a naturally occurring vancomycin-dependent Enterococcus faecium from a patient with bacteremia.
Mitchell SL, Mattei LM, Alby K. Infect Genet Evol. 2017 Aug;52:96-99. doi: 10.1016/j.meegid.2017.05.002. Epub 2017 May 4. PubMed PMID: 28479127.

swga: a primer design toolkit for selective whole genome amplification.
Clarke EL, Sundararaman SA, Seifert SN, Bushman FD, Hahn BH, Brisson D.  Bioinformatics. 2017 Jul 15;33(14):2071-2077. doi: 10.1093/bioinformatics/btx118. PubMed PMID: 28334194.

Diabetes Enhances IL-17 Expression and Alters the Oral Microbiome to Increase Its Pathogenicity.
Xiao E, Mattos M, Vieira GHA, Chen S, Corrêa JD, Wu Y, Albiero ML, Bittinger K, Graves DT.  Cell Host Microbe. 2017 Jul 12;22(1):120-128.e4. doi: 10.1016/j.chom.2017.06.014. PubMed PMID: 28704648; PubMed Central PMCID: PMC5701758.

Cutaneous Leishmaniasis Induces a Transmissible Dysbiotic Skin Microbiota that Promotes Skin Inflammation
Gimblet C, Meisel JS, Loesche MA, Cole SD, Horwinski J, Novais FO, Misic AM, Bradley CW, Beiting DP, Rankin SC, Carvalho LP, Carvalho EM, Scott P, Grice EA.  Cell Host Microbe. 2017 Jul 12;22(1):13-24.e4. doi: 10.1016/j.chom.2017.06.006. Epub 2017 Jun 29. PubMed PMID: 28669672; PubMed Central PMCID: PMC5555377.

Association Between Breast Milk Bacterial Communities and Establishment and Development of the Infant Gut Microbiome.
Pannaraj PS, Li F, Cerini C, Bender JM, Yang S, Rollie A, Adisetiyo H, Zabih S, Lincez PJ, Bittinger K, Bailey A, Bushman FD, Sleasman JW, Aldrovandi GM.  JAMA Pediatr. 2017 Jul 1;171(7):647-654. doi: 10.1001/jamapediatrics.2017.0378. PubMed PMID: 28492938; PubMed Central PMCID: PMC5710346.

Optimizing methods and dodging pitfalls in microbiome research.
Kim D, Hofstaedter CE, Zhao C, Mattei L, Tanes C, Clarke E, Lauder A, Sherrill-Mix S, Chehoud C, Kelsen J, Conrad M, Collman RG, Baldassano R, Bushman FD, Bittinger K.  Microbiome. 2017 May 5;5(1):52. doi: 10.1186/s40168-017-0267-5. Review. PubMed PMID: 28476139; PubMed Central PMCID: PMC5420141.

Genome Sequence of a Toxin-Positive Clostridium difficile Strain Isolated from Murine Feces.
Etienne-Mesmin L, Chassaing B, Adekunle O, Mattei LM, Edwards AN, McBride SM, Bushman FD, Gewirtz AT.  Genome Announc. 2017 Apr 6;5(14). pii: e00088-17. doi: 10.1128/genomeA.00088-17. PubMed PMID: 28385835; PubMed Central PMCID: PMC5383883.

Normalization and microbial differential abundance strategies depend upon data characteristics
Weiss S, Xu ZZ, Peddada S, Amir A, Bittinger K, Gonzalez A, Lozupone C, Zaneveld JR, Vázquez-Baeza Y, Birmingham A, Hyde ER, Knight R.  Microbiome. 2017 Mar 3;5(1):27. doi: 10.1186/s40168-017-0237-y. PubMed PMID: 28253908; PubMed Central PMCID: PMC5335496.

Temporal Stability in Chronic Wound Microbiota Is Associated With Poor Healing
Loesche M, Gardner SE, Kalan L, Horwinski J, Zheng Q, Hodkinson BP, Tyldsley AS, Franciscus CL, Hillis SL, Mehta S, Margolis DJ, Grice EA.  J Invest Dermatol. 2017 Jan;137(1):237-244. doi: 10.1016/j.jid.2016.08.009. Epub 2016 Aug 24. PubMed PMID: 27566400; PubMed Central PMCID: PMC5279919.

Endothelial TLR4 and the microbiome drive cerebral cavernous malformations
Tang A, Choi J, Kotzin J, Yang Y, Hong C, Hobson N, Girard R, Zeineddine H, Lightle R, Moore T, Cao Y, Shenkar R, Chen M, Mericko P, Yang J, Li L, Tanes C, Kobuley D, Vosa U, Whitehead K, Li D, Franke L, Hart B, Schwaninger M, Heano-Mejia, et al. Nature. 2017 May 10; doi:10.1038/nature22075.

Accordion Order: 
0